Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-3Q5R1E6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-3Q5R1E6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Gm6623-201ENSMUST00000173570 544 ntBASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-3Q5R1E6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-3Q5R1E6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav6-3Q5R1E6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-3Q5R1E6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms