Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm27359-201ENSMUST00000184153 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm27785-201ENSMUST00000184268 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm27466-201ENSMUST00000184396 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm27703-201ENSMUST00000184836 110 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm18057-201ENSMUST00000208220 503 ntBASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav8d-2Q5R1B6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8d-2Q5R1B6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gm12428-201ENSMUST00000119844 727 ntBASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gm23547-201ENSMUST00000158210 271 ntBASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav8d-2Q5R1B6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8d-2Q5R1B6 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms