Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf20Q5DTM8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.79■□□□□ 0.6
Rnf20Q5DTM8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 App-207ENSMUST00000227737 2827 ntBASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Gm27357-201ENSMUST00000183754 135 ntBASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf20Q5DTM8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Gm9172-201ENSMUST00000212092 954 ntBASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf20Q5DTM8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf20Q5DTM8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf20Q5DTM8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf20Q5DTM8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Gm15165-201ENSMUST00000118140 502 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms