Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm11764-201ENSMUST00000120221 623 ntBASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Gm4899-201ENSMUST00000178708 719 ntBASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Gm19164-201ENSMUST00000210667 640 ntBASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h1Q4VGL6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm4995-201ENSMUST00000117247 432 ntBASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm15467-201ENSMUST00000120582 445 ntBASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h1Q4VGL6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm9727-201ENSMUST00000161387 555 ntBASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Gm37153-201ENSMUST00000193637 231 ntBASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h1Q4VGL6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Gm14494-201ENSMUST00000118786 435 ntBASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Gm5867-201ENSMUST00000063197 592 ntBASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h1Q4VGL6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h1Q4VGL6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms