Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm36967-201ENSMUST00000193814 266 ntBASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm27731-201ENSMUST00000185192 107 ntBASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm16026-204ENSMUST00000162652 683 ntBASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm27701-201ENSMUST00000184498 110 ntBASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc2Q4U2R1 Gm12390-201ENSMUST00000117897 397 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm37259-201ENSMUST00000193903 849 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm3436-201ENSMUST00000179930 840 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc2Q4U2R1 Gm14263-201ENSMUST00000117955 746 ntBASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Nsd1-205ENSMUST00000224693 852 ntBASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Gm2272-201ENSMUST00000194903 582 ntBASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Gm16499-203ENSMUST00000204633 2177 ntBASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Herc2Q4U2R1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Herc2Q4U2R1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms