Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SfswapQ3USH5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SfswapQ3USH5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SfswapQ3USH5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SfswapQ3USH5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SfswapQ3USH5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Gm9727-201ENSMUST00000161387 555 ntBASIC18.75■□□□□ 0.59
SfswapQ3USH5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Gm2213-201ENSMUST00000197485 688 ntBASIC18.75■□□□□ 0.59
SfswapQ3USH5 Gm45167-201ENSMUST00000208007 322 ntBASIC18.75■□□□□ 0.59
SfswapQ3USH5 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.75■□□□□ 0.59
SfswapQ3USH5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SfswapQ3USH5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Gm14494-201ENSMUST00000118786 435 ntBASIC18.74■□□□□ 0.59
SfswapQ3USH5 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.74■□□□□ 0.59
SfswapQ3USH5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.74■□□□□ 0.59
SfswapQ3USH5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.74■□□□□ 0.59
SfswapQ3USH5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
SfswapQ3USH5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms