Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uspl1Q3ULM6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uspl1Q3ULM6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Uspl1Q3ULM6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Gm7230-201ENSMUST00000173026 815 ntBASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Uspl1Q3ULM6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Uspl1Q3ULM6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Uspl1Q3ULM6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Gm10060-201ENSMUST00000212002 111 ntBASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Uspl1Q3ULM6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Uspl1Q3ULM6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms