Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Birc2-201ENSMUST00000054878 378 ntBASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Upf3bQ3ULL6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm8825-201ENSMUST00000182565 998 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm4518-201ENSMUST00000182638 718 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm34391-201ENSMUST00000203706 907 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Upf3bQ3ULL6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.87■□□□□ 0.29
Upf3bQ3ULL6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm4459-201ENSMUST00000118750 468 ntBASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm12497-201ENSMUST00000138778 237 ntBASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf3bQ3ULL6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf3bQ3ULL6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms