Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brf2Q3UAW9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brf2Q3UAW9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brf2Q3UAW9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Rprl3-201ENSMUST00000157400 290 ntBASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.85□□□□□ -0.03
Brf2Q3UAW9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms