Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm10766-202ENSMUST00000194123 606 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm7783-201ENSMUST00000204795 781 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ush2AQ2QI47 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gm22334-201ENSMUST00000158070 133 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gm28911-201ENSMUST00000188837 117 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gm8096-201ENSMUST00000209921 1591 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Hsf1-207ENSMUST00000228371 2102 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gm5523-201ENSMUST00000180415 997 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Wnt10b-206ENSMUST00000228546 2709 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Gm43822-201ENSMUST00000200285 476 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 AC158538.2-201ENSMUST00000225455 906 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.32□□□□□ -1.08
Ush2AQ2QI47 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ush2AQ2QI47 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 AC155637.1-201ENSMUST00000218560 636 ntBASIC8.31□□□□□ -1.08
Ush2AQ2QI47 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Gm9176-201ENSMUST00000219955 1120 ntBASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Gm3436-201ENSMUST00000179930 840 ntBASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Ush2AQ2QI47 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ush2AQ2QI47 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms