Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atf4Q06507 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Atf4Q06507 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atf4Q06507 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15□□□□□ -0.01
Atf4Q06507 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Atf4Q06507 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Gm23935-201ENSMUST00000102303 57 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Gm24270-201ENSMUST00000102326 57 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Atf4Q06507 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Gm24245-201ENSMUST00000157318 57 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.99□□□□□ -0.01
Atf4Q06507 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.99□□□□□ -0.01
Atf4Q06507 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.99□□□□□ -0.01
Atf4Q06507 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.99□□□□□ -0.01
Atf4Q06507 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atf4Q06507 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Gm7063-201ENSMUST00000186840 981 ntBASIC14.98□□□□□ -0.01
Atf4Q06507 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.98□□□□□ -0.01
Atf4Q06507 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.98□□□□□ -0.01
Atf4Q06507 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.98□□□□□ -0.01
Atf4Q06507 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.98□□□□□ -0.01
Atf4Q06507 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atf4Q06507 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Atf4Q06507 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Atf4Q06507 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm7230-201ENSMUST00000173026 815 ntBASIC14.97□□□□□ -0.01
Atf4Q06507 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.97□□□□□ -0.01
Atf4Q06507 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.97□□□□□ -0.01
Atf4Q06507 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm44430-201ENSMUST00000203376 995 ntBASIC14.97□□□□□ -0.01
Atf4Q06507 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.97□□□□□ -0.01
Atf4Q06507 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.97□□□□□ -0.01
Atf4Q06507 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.97□□□□□ -0.01
Atf4Q06507 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.97□□□□□ -0.01
Atf4Q06507 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atf4Q06507 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms