Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.53□□□□□ -0.56
Hspg2Q05793 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hspg2Q05793 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hspg2Q05793 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.53□□□□□ -0.56
Hspg2Q05793 Gm5779-201ENSMUST00000218467 910 ntBASIC11.53□□□□□ -0.56
Hspg2Q05793 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.53□□□□□ -0.56
Hspg2Q05793 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.53□□□□□ -0.56
Hspg2Q05793 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hspg2Q05793 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Hspg2Q05793 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.52□□□□□ -0.56
Hspg2Q05793 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.52□□□□□ -0.56
Hspg2Q05793 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hspg2Q05793 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hspg2Q05793 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hspg2Q05793 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hspg2Q05793 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hspg2Q05793 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.56
Hspg2Q05793 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Gm18489-201ENSMUST00000172565 551 ntBASIC11.52□□□□□ -0.57
Hspg2Q05793 Mir7085-201ENSMUST00000184353 66 ntBASIC11.52□□□□□ -0.57
Hspg2Q05793 Mir6420-201ENSMUST00000185032 102 ntBASIC11.52□□□□□ -0.57
Hspg2Q05793 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hspg2Q05793 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hspg2Q05793 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm12490-201ENSMUST00000120255 560 ntBASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm43182-201ENSMUST00000199476 2528 ntBASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.51□□□□□ -0.57
Hspg2Q05793 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm14719-201ENSMUST00000121891 340 ntBASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hspg2Q05793 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.51□□□□□ -0.57
Hspg2Q05793 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Gm14928-201ENSMUST00000120198 477 ntBASIC11.5□□□□□ -0.57
Hspg2Q05793 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hspg2Q05793 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Hspg2Q05793 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hspg2Q05793 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Gm16198-201ENSMUST00000118766 670 ntBASIC11.5□□□□□ -0.57
Hspg2Q05793 Gm13829-201ENSMUST00000119600 138 ntBASIC11.5□□□□□ -0.57
Hspg2Q05793 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms