Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col10a1Q05306 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.56□□□□□ -0.08
Col10a1Q05306 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.56□□□□□ -0.08
Col10a1Q05306 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.56□□□□□ -0.08
Col10a1Q05306 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.56□□□□□ -0.08
Col10a1Q05306 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col10a1Q05306 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col10a1Q05306 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.55□□□□□ -0.08
Col10a1Q05306 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Gm34391-201ENSMUST00000203706 907 ntBASIC14.55□□□□□ -0.08
Col10a1Q05306 Gm9172-201ENSMUST00000212092 954 ntBASIC14.55□□□□□ -0.08
Col10a1Q05306 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col10a1Q05306 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col10a1Q05306 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.54□□□□□ -0.08
Col10a1Q05306 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Gm24589-201ENSMUST00000116692 94 ntBASIC14.54□□□□□ -0.08
Col10a1Q05306 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.54□□□□□ -0.08
Col10a1Q05306 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.54□□□□□ -0.08
Col10a1Q05306 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col10a1Q05306 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col10a1Q05306 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col10a1Q05306 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Col10a1Q05306 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col10a1Q05306 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Col10a1Q05306 Gm43347-201ENSMUST00000200226 580 ntBASIC14.53□□□□□ -0.08
Col10a1Q05306 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.53□□□□□ -0.08
Col10a1Q05306 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.53□□□□□ -0.08
Col10a1Q05306 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col10a1Q05306 Birc2-201ENSMUST00000054878 378 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms