Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Gm15920-201ENSMUST00000118998 402 ntBASIC19.76■□□□□ 0.75
Nkx2-3P97334 Gm13616-201ENSMUST00000120600 222 ntBASIC19.76■□□□□ 0.75
Nkx2-3P97334 Mir1895-201ENSMUST00000122615 79 ntBASIC19.76■□□□□ 0.75
Nkx2-3P97334 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx2-3P97334 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx2-3P97334 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.75■□□□□ 0.75
Nkx2-3P97334 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nkx2-3P97334 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.74■□□□□ 0.75
Nkx2-3P97334 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Mir6956-201ENSMUST00000183598 62 ntBASIC19.74■□□□□ 0.75
Nkx2-3P97334 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.74■□□□□ 0.75
Nkx2-3P97334 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.74■□□□□ 0.75
Nkx2-3P97334 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.74■□□□□ 0.75
Nkx2-3P97334 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-3P97334 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nkx2-3P97334 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.73■□□□□ 0.75
Nkx2-3P97334 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-3P97334 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.73■□□□□ 0.75
Nkx2-3P97334 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.72■□□□□ 0.75
Nkx2-3P97334 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gm11025-201ENSMUST00000140773 466 ntBASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gm43474-201ENSMUST00000196415 774 ntBASIC19.72■□□□□ 0.75
Nkx2-3P97334 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-3P97334 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms