Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm5P62322 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm5P62322 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm5P62322 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.21□□□□□ -0.29
Lsm5P62322 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lsm5P62322 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Lsm5P62322 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm5P62322 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Lsm5P62322 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Gm7638-201ENSMUST00000121348 967 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Gm43183-201ENSMUST00000200632 547 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lsm5P62322 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.2□□□□□ -0.3
Lsm5P62322 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lsm5P62322 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm5P62322 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lsm5P62322 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm5P62322 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.19□□□□□ -0.3
Lsm5P62322 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.19□□□□□ -0.3
Lsm5P62322 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lsm5P62322 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Lsm5P62322 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lsm5P62322 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.18□□□□□ -0.3
Lsm5P62322 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm5P62322 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms