Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Gm33142-201ENSMUST00000193913 867 ntBASIC13.94□□□□□ -0.18
Sec61a1P61620 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
Sec61a1P61620 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a1P61620 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Sec61a1P61620 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a1P61620 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a1P61620 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sec61a1P61620 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.93□□□□□ -0.18
Sec61a1P61620 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sec61a1P61620 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.92□□□□□ -0.18
Sec61a1P61620 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.92□□□□□ -0.18
Sec61a1P61620 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.92□□□□□ -0.18
Sec61a1P61620 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sec61a1P61620 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.91□□□□□ -0.18
Sec61a1P61620 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Gm25016-201ENSMUST00000158399 131 ntBASIC13.91□□□□□ -0.18
Sec61a1P61620 Gm5587-201ENSMUST00000206270 674 ntBASIC13.91□□□□□ -0.18
Sec61a1P61620 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sec61a1P61620 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sec61a1P61620 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a1P61620 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a1P61620 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms