Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.39□□□□□ -0.43
Ctdsp1P58466 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.39□□□□□ -0.43
Ctdsp1P58466 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Gm13234-201ENSMUST00000120010 747 ntBASIC12.39□□□□□ -0.43
Ctdsp1P58466 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ctdsp1P58466 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdsp1P58466 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Gm27000-201ENSMUST00000182943 842 ntBASIC12.37□□□□□ -0.43
Ctdsp1P58466 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.37□□□□□ -0.43
Ctdsp1P58466 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
Ctdsp1P58466 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ctdsp1P58466 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms