Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Abcd3P55096 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Abcd3P55096 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
Abcd3P55096 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Abcd3P55096 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Abcd3P55096 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Abcd3P55096 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.11□□□□□ -0.15
Abcd3P55096 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Abcd3P55096 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Abcd3P55096 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Abcd3P55096 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Abcd3P55096 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Gm33142-201ENSMUST00000193913 867 ntBASIC14.11□□□□□ -0.15
Abcd3P55096 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.11□□□□□ -0.15
Abcd3P55096 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.11□□□□□ -0.15
Abcd3P55096 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Abcd3P55096 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Abcd3P55096 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Abcd3P55096 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Abcd3P55096 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Abcd3P55096 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Abcd3P55096 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.1□□□□□ -0.15
Abcd3P55096 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.1□□□□□ -0.15
Abcd3P55096 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.1□□□□□ -0.15
Abcd3P55096 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.1□□□□□ -0.15
Abcd3P55096 Gm7284-201ENSMUST00000131667 944 ntBASIC14.1□□□□□ -0.15
Abcd3P55096 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Abcd3P55096 Gm27704-201ENSMUST00000185094 107 ntBASIC14.1□□□□□ -0.15
Abcd3P55096 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Abcd3P55096 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.1□□□□□ -0.15
Abcd3P55096 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Abcd3P55096 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Abcd3P55096 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.1□□□□□ -0.15
Abcd3P55096 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Abcd3P55096 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.09□□□□□ -0.15
Abcd3P55096 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Abcd3P55096 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.09□□□□□ -0.15
Abcd3P55096 Gm44454-201ENSMUST00000198541 138 ntBASIC14.09□□□□□ -0.15
Abcd3P55096 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Abcd3P55096 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.09□□□□□ -0.15
Abcd3P55096 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms