Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Msh6P54276 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.92■□□□□ 0.78
Msh6P54276 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.92■□□□□ 0.78
Msh6P54276 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Msh6P54276 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Msh6P54276 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Gm45747-201ENSMUST00000212203 999 ntBASIC19.91■□□□□ 0.78
Msh6P54276 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.91■□□□□ 0.78
Msh6P54276 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh6P54276 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Msh6P54276 Gm15427-201ENSMUST00000117288 531 ntBASIC19.9■□□□□ 0.78
Msh6P54276 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.9■□□□□ 0.78
Msh6P54276 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.9■□□□□ 0.78
Msh6P54276 Gm19164-201ENSMUST00000210667 640 ntBASIC19.9■□□□□ 0.78
Msh6P54276 Gm7787-201ENSMUST00000216858 688 ntBASIC19.9■□□□□ 0.78
Msh6P54276 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Msh6P54276 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.9■□□□□ 0.78
Msh6P54276 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh6P54276 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.9■□□□□ 0.78
Msh6P54276 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Msh6P54276 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Msh6P54276 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Msh6P54276 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Msh6P54276 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.89■□□□□ 0.78
Msh6P54276 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Gm5177-201ENSMUST00000183092 997 ntBASIC19.89■□□□□ 0.77
Msh6P54276 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Msh6P54276 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.89■□□□□ 0.77
Msh6P54276 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.89■□□□□ 0.77
Msh6P54276 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh6P54276 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Msh6P54276 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Msh6P54276 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.88■□□□□ 0.77
Msh6P54276 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Msh6P54276 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Msh6P54276 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Msh6P54276 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.88■□□□□ 0.77
Msh6P54276 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh6P54276 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms