Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TubP50586 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.18■□□□□ 0.18
TubP50586 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TubP50586 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TubP50586 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TubP50586 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.17■□□□□ 0.18
TubP50586 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TubP50586 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TubP50586 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.17■□□□□ 0.18
TubP50586 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TubP50586 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TubP50586 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.17■□□□□ 0.18
TubP50586 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TubP50586 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.16■□□□□ 0.18
TubP50586 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TubP50586 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TubP50586 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.16■□□□□ 0.18
TubP50586 Gm8097-201ENSMUST00000117903 829 ntBASIC16.16■□□□□ 0.18
TubP50586 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Gm44357-201ENSMUST00000195897 142 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm19658-201ENSMUST00000196231 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44367-201ENSMUST00000196836 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44350-201ENSMUST00000197197 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44390-201ENSMUST00000197533 144 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44313-201ENSMUST00000198018 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44486-201ENSMUST00000198508 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44314-201ENSMUST00000199263 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44394-201ENSMUST00000199558 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44484-201ENSMUST00000199873 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44466-201ENSMUST00000200264 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm44359-201ENSMUST00000200671 138 ntBASIC16.16■□□□□ 0.18
TubP50586 Gm18622-201ENSMUST00000219361 595 ntBASIC16.16■□□□□ 0.18
TubP50586 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.16■□□□□ 0.18
TubP50586 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.16■□□□□ 0.18
TubP50586 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TubP50586 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TubP50586 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.15■□□□□ 0.18
TubP50586 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.15■□□□□ 0.18
TubP50586 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Gm11452-201ENSMUST00000122376 690 ntBASIC16.15■□□□□ 0.18
TubP50586 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.15■□□□□ 0.18
TubP50586 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.15■□□□□ 0.18
TubP50586 Gm5864-201ENSMUST00000202263 970 ntBASIC16.15■□□□□ 0.18
TubP50586 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.15■□□□□ 0.18
TubP50586 Gm6296-201ENSMUST00000222599 943 ntBASIC16.15■□□□□ 0.18
TubP50586 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TubP50586 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TubP50586 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TubP50586 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.14■□□□□ 0.17
TubP50586 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TubP50586 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TubP50586 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TubP50586 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
TubP50586 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Mir8098-201ENSMUST00000184011 137 ntBASIC16.14■□□□□ 0.17
TubP50586 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.14■□□□□ 0.17
TubP50586 Gm6376-201ENSMUST00000209407 580 ntBASIC16.14■□□□□ 0.17
TubP50586 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TubP50586 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms