Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.92■□□□□ 0.62
Atp6v1aP50516 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.92■□□□□ 0.62
Atp6v1aP50516 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atp6v1aP50516 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm15427-201ENSMUST00000117288 531 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm13365-201ENSMUST00000121188 973 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm6257-201ENSMUST00000163864 910 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm5177-201ENSMUST00000183092 997 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.91■□□□□ 0.62
Atp6v1aP50516 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atp6v1aP50516 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 AA543401-201ENSMUST00000164248 1269 ntBASIC18.9■□□□□ 0.62
Atp6v1aP50516 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Gm44335-201ENSMUST00000196879 141 ntBASIC18.9■□□□□ 0.62
Atp6v1aP50516 Gm44297-201ENSMUST00000198304 141 ntBASIC18.9■□□□□ 0.62
Atp6v1aP50516 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Gm44346-201ENSMUST00000198851 141 ntBASIC18.9■□□□□ 0.62
Atp6v1aP50516 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp6v1aP50516 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.9■□□□□ 0.62
Atp6v1aP50516 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Atp6v1aP50516 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Atp6v1aP50516 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Gm27301-201ENSMUST00000184012 127 ntBASIC18.89■□□□□ 0.61
Atp6v1aP50516 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.89■□□□□ 0.61
Atp6v1aP50516 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp6v1aP50516 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Gm5312-201ENSMUST00000203728 547 ntBASIC18.88■□□□□ 0.61
Atp6v1aP50516 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.88■□□□□ 0.61
Atp6v1aP50516 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp6v1aP50516 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms