Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.24■□□□□ 0.03
Rph3aP47708 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rph3aP47708 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rph3aP47708 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.23■□□□□ 0.03
Rph3aP47708 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Rph3aP47708 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.23■□□□□ 0.03
Rph3aP47708 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.23■□□□□ 0.03
Rph3aP47708 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rph3aP47708 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
Rph3aP47708 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rph3aP47708 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rph3aP47708 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rph3aP47708 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.22■□□□□ 0.03
Rph3aP47708 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rph3aP47708 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.22■□□□□ 0.03
Rph3aP47708 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.22■□□□□ 0.03
Rph3aP47708 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.22■□□□□ 0.03
Rph3aP47708 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rph3aP47708 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.22■□□□□ 0.03
Rph3aP47708 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rph3aP47708 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.21■□□□□ 0.03
Rph3aP47708 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rph3aP47708 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rph3aP47708 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Rph3aP47708 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rph3aP47708 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Gm15372-201ENSMUST00000120729 834 ntBASIC15.21■□□□□ 0.03
Rph3aP47708 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.21■□□□□ 0.03
Rph3aP47708 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rph3aP47708 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Rph3aP47708 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Rph3aP47708 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Rph3aP47708 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.21■□□□□ 0.03
Rph3aP47708 Ank2-226ENSMUST00000189368 339 ntBASIC15.21■□□□□ 0.03
Rph3aP47708 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.21■□□□□ 0.03
Rph3aP47708 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.21■□□□□ 0.03
Rph3aP47708 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.21■□□□□ 0.03
Rph3aP47708 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rph3aP47708 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rph3aP47708 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rph3aP47708 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rph3aP47708 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rph3aP47708 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rph3aP47708 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rph3aP47708 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rph3aP47708 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.2■□□□□ 0.02
Rph3aP47708 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Gm18669-201ENSMUST00000216049 778 ntBASIC15.2■□□□□ 0.02
Rph3aP47708 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.2■□□□□ 0.02
Rph3aP47708 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rph3aP47708 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms