Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox18P43680 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox18P43680 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Sox18P43680 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Sox18P43680 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox18P43680 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Sox18P43680 Gm13365-201ENSMUST00000121188 973 ntBASIC15.08■□□□□ 0
Sox18P43680 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Sox18P43680 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.08■□□□□ 0
Sox18P43680 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Gm25948-201ENSMUST00000175334 112 ntBASIC15.08■□□□□ 0
Sox18P43680 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.08■□□□□ 0
Sox18P43680 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox18P43680 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.07■□□□□ 0
Sox18P43680 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sox18P43680 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.07■□□□□ 0
Sox18P43680 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Gm8825-201ENSMUST00000182565 998 ntBASIC15.07■□□□□ 0
Sox18P43680 Mir6977-201ENSMUST00000184960 64 ntBASIC15.07■□□□□ 0
Sox18P43680 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.07■□□□□ 0
Sox18P43680 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.07■□□□□ 0
Sox18P43680 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox18P43680 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Sox18P43680 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.07■□□□□ 0
Sox18P43680 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sox18P43680 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox18P43680 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.07■□□□□ 0
Sox18P43680 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox18P43680 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.06■□□□□ 0
Sox18P43680 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox18P43680 Gm12428-201ENSMUST00000119844 727 ntBASIC15.06■□□□□ 0
Sox18P43680 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.06■□□□□ 0
Sox18P43680 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Sox18P43680 Gm43767-201ENSMUST00000198933 381 ntBASIC15.06■□□□□ 0
Sox18P43680 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.06■□□□□ 0
Sox18P43680 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox18P43680 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.06■□□□□ 0
Sox18P43680 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.06■□□□□ 0
Sox18P43680 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox18P43680 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sox18P43680 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox18P43680 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox18P43680 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox18P43680 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox18P43680 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.05■□□□□ -0
Sox18P43680 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox18P43680 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox18P43680 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.05■□□□□ -0
Sox18P43680 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Sox18P43680 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox18P43680 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms