Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Gm10231-201ENSMUST00000181584 441 ntBASIC17.72■□□□□ 0.43
Sdc2P43407 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Gm10175-202ENSMUST00000208752 441 ntBASIC17.72■□□□□ 0.43
Sdc2P43407 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc2P43407 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sdc2P43407 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc2P43407 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Sybu-209ENSMUST00000228639 4113 ntBASIC17.71■□□□□ 0.43
Sdc2P43407 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Mir6404-201ENSMUST00000183699 94 ntBASIC17.71■□□□□ 0.43
Sdc2P43407 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.71■□□□□ 0.43
Sdc2P43407 Gm5587-201ENSMUST00000206270 674 ntBASIC17.71■□□□□ 0.43
Sdc2P43407 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.71■□□□□ 0.43
Sdc2P43407 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sdc2P43407 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sdc2P43407 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc2P43407 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.7■□□□□ 0.42
Sdc2P43407 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sdc2P43407 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sdc2P43407 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sdc2P43407 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sdc2P43407 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Sdc2P43407 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Sdc2P43407 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sdc2P43407 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc2P43407 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Sdc2P43407 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sdc2P43407 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.69■□□□□ 0.42
Sdc2P43407 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Sdc2P43407 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.69■□□□□ 0.42
Sdc2P43407 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sdc2P43407 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc2P43407 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc2P43407 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms