Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.3■□□□□ 0.2
Msh2P43247 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh2P43247 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Msh2P43247 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.3■□□□□ 0.2
Msh2P43247 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh2P43247 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.29■□□□□ 0.2
Msh2P43247 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.29■□□□□ 0.2
Msh2P43247 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Msh2P43247 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh2P43247 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Msh2P43247 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.29■□□□□ 0.2
Msh2P43247 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
Msh2P43247 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh2P43247 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh2P43247 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh2P43247 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.28■□□□□ 0.2
Msh2P43247 Mir770-201ENSMUST00000103252 94 ntBASIC16.28■□□□□ 0.2
Msh2P43247 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh2P43247 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh2P43247 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Msh2P43247 Gm29707-201ENSMUST00000196325 491 ntBASIC16.28■□□□□ 0.2
Msh2P43247 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Msh2P43247 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh2P43247 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Msh2P43247 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Msh2P43247 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Msh2P43247 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Msh2P43247 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Msh2P43247 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Msh2P43247 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.27■□□□□ 0.2
Msh2P43247 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.27■□□□□ 0.2
Msh2P43247 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.27■□□□□ 0.2
Msh2P43247 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh2P43247 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh2P43247 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Msh2P43247 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms