Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Abca1P41233 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.12□□□□□ -0.31
Abca1P41233 Mir3113-201ENSMUST00000175478 76 ntBASIC13.12□□□□□ -0.31
Abca1P41233 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.12□□□□□ -0.31
Abca1P41233 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Abca1P41233 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Abca1P41233 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Gm4459-201ENSMUST00000118750 468 ntBASIC13.11□□□□□ -0.31
Abca1P41233 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.11□□□□□ -0.31
Abca1P41233 Gm9172-201ENSMUST00000212092 954 ntBASIC13.11□□□□□ -0.31
Abca1P41233 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.11□□□□□ -0.31
Abca1P41233 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.11□□□□□ -0.31
Abca1P41233 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.11□□□□□ -0.31
Abca1P41233 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Abca1P41233 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Abca1P41233 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.1□□□□□ -0.31
Abca1P41233 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.1□□□□□ -0.31
Abca1P41233 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Abca1P41233 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Abca1P41233 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.1□□□□□ -0.31
Abca1P41233 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Abca1P41233 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Gm27397-201ENSMUST00000184997 107 ntBASIC13.1□□□□□ -0.31
Abca1P41233 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.1□□□□□ -0.31
Abca1P41233 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.1□□□□□ -0.31
Abca1P41233 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Abca1P41233 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.1□□□□□ -0.31
Abca1P41233 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.1□□□□□ -0.31
Abca1P41233 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Abca1P41233 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Abca1P41233 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms