Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.66□□□□□ -0.06
Nedd8P29595 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Gm18671-201ENSMUST00000214826 683 ntBASIC14.66□□□□□ -0.06
Nedd8P29595 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.66□□□□□ -0.06
Nedd8P29595 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nedd8P29595 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nedd8P29595 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.65□□□□□ -0.06
Nedd8P29595 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nedd8P29595 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nedd8P29595 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nedd8P29595 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.65□□□□□ -0.07
Nedd8P29595 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Nedd8P29595 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.64□□□□□ -0.07
Nedd8P29595 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Rab3c-203ENSMUST00000224180 967 ntBASIC14.64□□□□□ -0.07
Nedd8P29595 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.64□□□□□ -0.07
Nedd8P29595 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.64□□□□□ -0.07
Nedd8P29595 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nedd8P29595 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Nedd8P29595 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nedd8P29595 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nedd8P29595 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.63□□□□□ -0.07
Nedd8P29595 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.63□□□□□ -0.07
Nedd8P29595 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.63□□□□□ -0.07
Nedd8P29595 Gm42545-201ENSMUST00000202755 922 ntBASIC14.63□□□□□ -0.07
Nedd8P29595 Gm4968-201ENSMUST00000071458 858 ntBASIC14.63□□□□□ -0.07
Nedd8P29595 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.63□□□□□ -0.07
Nedd8P29595 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nedd8P29595 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms