Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Pde6bP23440 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6bP23440 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6bP23440 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pde6bP23440 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6bP23440 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pde6bP23440 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pde6bP23440 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.21■□□□□ 0.34
Pde6bP23440 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Pde6bP23440 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Pde6bP23440 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pde6bP23440 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pde6bP23440 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pde6bP23440 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.2■□□□□ 0.34
Pde6bP23440 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.2■□□□□ 0.34
Pde6bP23440 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6bP23440 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pde6bP23440 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pde6bP23440 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6bP23440 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pde6bP23440 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pde6bP23440 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.19■□□□□ 0.34
Pde6bP23440 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.19■□□□□ 0.34
Pde6bP23440 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.19■□□□□ 0.34
Pde6bP23440 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6bP23440 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pde6bP23440 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pde6bP23440 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6bP23440 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6bP23440 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.18■□□□□ 0.34
Pde6bP23440 Gm9727-201ENSMUST00000161387 555 ntBASIC17.18■□□□□ 0.34
Pde6bP23440 Gm6736-201ENSMUST00000166583 948 ntBASIC17.18■□□□□ 0.34
Pde6bP23440 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6bP23440 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6bP23440 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6bP23440 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.17■□□□□ 0.34
Pde6bP23440 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.17■□□□□ 0.34
Pde6bP23440 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pde6bP23440 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6bP23440 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pde6bP23440 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.17■□□□□ 0.34
Pde6bP23440 Gm27702-201ENSMUST00000184512 56 ntBASIC17.17■□□□□ 0.34
Pde6bP23440 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms