Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.06□□□□□ -0.16
P20040 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
P20040 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.06□□□□□ -0.16
P20040 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.06□□□□□ -0.16
P20040 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
P20040 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.05□□□□□ -0.16
P20040 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.05□□□□□ -0.16
P20040 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
P20040 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
P20040 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
P20040 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
P20040 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.04□□□□□ -0.16
P20040 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
P20040 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
P20040 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Gm7284-201ENSMUST00000131667 944 ntBASIC14.04□□□□□ -0.16
P20040 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.04□□□□□ -0.16
P20040 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
P20040 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P20040 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P20040 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
P20040 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
P20040 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P20040 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
P20040 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.03□□□□□ -0.16
P20040 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
P20040 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.03□□□□□ -0.16
P20040 Gm27704-201ENSMUST00000185094 107 ntBASIC14.03□□□□□ -0.16
P20040 Gm29707-201ENSMUST00000196325 491 ntBASIC14.03□□□□□ -0.16
P20040 Gm44450-201ENSMUST00000199528 114 ntBASIC14.03□□□□□ -0.16
P20040 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
P20040 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P20040 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms