Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.96□□□□□ -0.01
ApoeP08226 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ApoeP08226 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.96□□□□□ -0.01
ApoeP08226 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Gm715-201ENSMUST00000117865 831 ntBASIC14.96□□□□□ -0.01
ApoeP08226 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ApoeP08226 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ApoeP08226 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ApoeP08226 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ApoeP08226 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ApoeP08226 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ApoeP08226 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
ApoeP08226 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
ApoeP08226 Sybu-209ENSMUST00000228639 4113 ntBASIC14.96□□□□□ -0.02
ApoeP08226 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ApoeP08226 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ApoeP08226 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ApoeP08226 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.95□□□□□ -0.02
ApoeP08226 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.95□□□□□ -0.02
ApoeP08226 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ApoeP08226 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.95□□□□□ -0.02
ApoeP08226 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
ApoeP08226 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ApoeP08226 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
ApoeP08226 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.94□□□□□ -0.02
ApoeP08226 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.94□□□□□ -0.02
ApoeP08226 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ApoeP08226 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.94□□□□□ -0.02
ApoeP08226 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
ApoeP08226 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
ApoeP08226 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.94□□□□□ -0.02
ApoeP08226 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.94□□□□□ -0.02
ApoeP08226 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ApoeP08226 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ApoeP08226 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Gm13474-201ENSMUST00000122466 815 ntBASIC14.93□□□□□ -0.02
ApoeP08226 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ApoeP08226 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.93□□□□□ -0.02
ApoeP08226 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ApoeP08226 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.93□□□□□ -0.02
ApoeP08226 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms