Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.22□□□□□ -0.29
Hoxa3P02831 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.22□□□□□ -0.29
Hoxa3P02831 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hoxa3P02831 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hoxa3P02831 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.22□□□□□ -0.29
Hoxa3P02831 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Gm18733-201ENSMUST00000173950 856 ntBASIC13.21□□□□□ -0.29
Hoxa3P02831 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Gm18195-201ENSMUST00000207604 706 ntBASIC13.21□□□□□ -0.29
Hoxa3P02831 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.21□□□□□ -0.29
Hoxa3P02831 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hoxa3P02831 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hoxa3P02831 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hoxa3P02831 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.2□□□□□ -0.3
Hoxa3P02831 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.2□□□□□ -0.3
Hoxa3P02831 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.2□□□□□ -0.3
Hoxa3P02831 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hoxa3P02831 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hoxa3P02831 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms