Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Gm14057-201ENSMUST00000120631 482 ntBASIC19.24■□□□□ 0.67
Col4a1P02463 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.24■□□□□ 0.67
Col4a1P02463 Rprl2-201ENSMUST00000157150 290 ntBASIC19.24■□□□□ 0.67
Col4a1P02463 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.24■□□□□ 0.67
Col4a1P02463 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.24■□□□□ 0.67
Col4a1P02463 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a1P02463 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.23■□□□□ 0.67
Col4a1P02463 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Col4a1P02463 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.23■□□□□ 0.67
Col4a1P02463 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a1P02463 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.22■□□□□ 0.67
Col4a1P02463 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22065-201ENSMUST00000103753 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22066-201ENSMUST00000103761 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24932-201ENSMUST00000103763 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24115-201ENSMUST00000103799 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22190-201ENSMUST00000103827 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22191-201ENSMUST00000103831 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24721-201ENSMUST00000103849 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm28018-201ENSMUST00000103869 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm26399-201ENSMUST00000103937 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.22■□□□□ 0.67
Col4a1P02463 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.22■□□□□ 0.67
Col4a1P02463 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.22■□□□□ 0.67
Col4a1P02463 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.22■□□□□ 0.67
Col4a1P02463 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25349-201ENSMUST00000177728 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm23616-201ENSMUST00000177797 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25871-201ENSMUST00000177816 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24752-201ENSMUST00000178240 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24496-201ENSMUST00000178287 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25649-201ENSMUST00000178476 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25548-201ENSMUST00000178681 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm23147-201ENSMUST00000178841 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm26095-201ENSMUST00000179270 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22171-201ENSMUST00000179283 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm23936-201ENSMUST00000179354 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm22619-201ENSMUST00000179516 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25255-201ENSMUST00000179579 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24755-201ENSMUST00000179691 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm26506-201ENSMUST00000179692 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm25086-201ENSMUST00000179931 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm23243-201ENSMUST00000180047 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24659-201ENSMUST00000180212 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm24169-201ENSMUST00000180244 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm23689-201ENSMUST00000180354 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm27359-201ENSMUST00000184153 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm27785-201ENSMUST00000184268 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm27466-201ENSMUST00000184396 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 Gm27703-201ENSMUST00000184836 110 ntBASIC19.22■□□□□ 0.67
Col4a1P02463 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.22■□□□□ 0.67
Col4a1P02463 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col4a1P02463 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a1P02463 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Col4a1P02463 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Col4a1P02463 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.21■□□□□ 0.67
Col4a1P02463 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Col4a1P02463 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.21■□□□□ 0.67
Col4a1P02463 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col4a1P02463 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a1P02463 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms