Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.66■□□□□ 0.26
Ifnb1P01575 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Olfr129-201ENSMUST00000122318 993 ntBASIC16.66■□□□□ 0.26
Ifnb1P01575 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.66■□□□□ 0.26
Ifnb1P01575 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ifnb1P01575 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm25406-201ENSMUST00000157599 105 ntBASIC16.65■□□□□ 0.26
Ifnb1P01575 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm27742-201ENSMUST00000184667 60 ntBASIC16.65■□□□□ 0.26
Ifnb1P01575 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.65■□□□□ 0.26
Ifnb1P01575 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.65■□□□□ 0.26
Ifnb1P01575 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ifnb1P01575 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.64■□□□□ 0.25
Ifnb1P01575 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.64■□□□□ 0.25
Ifnb1P01575 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Ifnb1P01575 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ifnb1P01575 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms