Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.35□□□□□ -0.27
Ifna1P01572 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Ifna1P01572 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ifna1P01572 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm21814-202ENSMUST00000203277 873 ntBASIC13.34□□□□□ -0.27
Ifna1P01572 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.34□□□□□ -0.27
Ifna1P01572 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ifna1P01572 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.34□□□□□ -0.27
Ifna1P01572 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.34□□□□□ -0.27
Ifna1P01572 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ifna1P01572 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ifna1P01572 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ifna1P01572 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ifna1P01572 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.33□□□□□ -0.27
Ifna1P01572 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.33□□□□□ -0.27
Ifna1P01572 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ifna1P01572 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ifna1P01572 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ifna1P01572 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.33□□□□□ -0.28
Ifna1P01572 Gm10653-202ENSMUST00000139570 835 ntBASIC13.33□□□□□ -0.28
Ifna1P01572 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.33□□□□□ -0.28
Ifna1P01572 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.33□□□□□ -0.28
Ifna1P01572 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ifna1P01572 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ifna1P01572 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.33□□□□□ -0.28
Ifna1P01572 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ifna1P01572 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ifna1P01572 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Gm13474-201ENSMUST00000122466 815 ntBASIC13.32□□□□□ -0.28
Ifna1P01572 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.32□□□□□ -0.28
Ifna1P01572 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ifna1P01572 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ifna1P01572 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.32□□□□□ -0.28
Ifna1P01572 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ifna1P01572 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Ifna1P01572 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms