Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.14□□□□□ -0.15
Hdac3O88895 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hdac3O88895 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.14□□□□□ -0.15
Hdac3O88895 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.14□□□□□ -0.15
Hdac3O88895 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hdac3O88895 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hdac3O88895 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hdac3O88895 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.14□□□□□ -0.15
Hdac3O88895 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hdac3O88895 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.13□□□□□ -0.15
Hdac3O88895 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hdac3O88895 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.13□□□□□ -0.15
Hdac3O88895 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hdac3O88895 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.13□□□□□ -0.15
Hdac3O88895 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hdac3O88895 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hdac3O88895 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Hdac3O88895 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.12□□□□□ -0.15
Hdac3O88895 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hdac3O88895 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hdac3O88895 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hdac3O88895 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hdac3O88895 Gm23634-201ENSMUST00000175071 91 ntBASIC14.12□□□□□ -0.15
Hdac3O88895 Gm45328-201ENSMUST00000210942 917 ntBASIC14.12□□□□□ -0.15
Hdac3O88895 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hdac3O88895 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hdac3O88895 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hdac3O88895 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hdac3O88895 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hdac3O88895 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hdac3O88895 Mir770-201ENSMUST00000103252 94 ntBASIC14.11□□□□□ -0.15
Hdac3O88895 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hdac3O88895 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 AA414768-201ENSMUST00000121924 1257 ntBASIC14.11□□□□□ -0.15
Hdac3O88895 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms