Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.07□□□□□ -0.16
CcnkO88874 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Gm13186-201ENSMUST00000118031 316 ntBASIC14.07□□□□□ -0.16
CcnkO88874 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.07□□□□□ -0.16
CcnkO88874 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.07□□□□□ -0.16
CcnkO88874 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CcnkO88874 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
CcnkO88874 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CcnkO88874 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.06□□□□□ -0.16
CcnkO88874 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.06□□□□□ -0.16
CcnkO88874 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.06□□□□□ -0.16
CcnkO88874 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CcnkO88874 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.06□□□□□ -0.16
CcnkO88874 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CcnkO88874 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.06□□□□□ -0.16
CcnkO88874 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.06□□□□□ -0.16
CcnkO88874 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CcnkO88874 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.06□□□□□ -0.16
CcnkO88874 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CcnkO88874 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CcnkO88874 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CcnkO88874 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CcnkO88874 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.05□□□□□ -0.16
CcnkO88874 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
CcnkO88874 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.05□□□□□ -0.16
CcnkO88874 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CcnkO88874 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcnkO88874 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CcnkO88874 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CcnkO88874 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.04□□□□□ -0.16
CcnkO88874 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.04□□□□□ -0.16
CcnkO88874 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CcnkO88874 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcnkO88874 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms