Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.14■□□□□ 0.01
Best1O88870 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Best1O88870 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Best1O88870 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.13■□□□□ 0.01
Best1O88870 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Best1O88870 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Best1O88870 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Best1O88870 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gm11779-201ENSMUST00000118541 368 ntBASIC15.13■□□□□ 0.01
Best1O88870 Gm15467-201ENSMUST00000120582 445 ntBASIC15.13■□□□□ 0.01
Best1O88870 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.13■□□□□ 0.01
Best1O88870 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.13■□□□□ 0.01
Best1O88870 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.13■□□□□ 0.01
Best1O88870 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.13■□□□□ 0.01
Best1O88870 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.13■□□□□ 0.01
Best1O88870 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.13■□□□□ 0.01
Best1O88870 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.13■□□□□ 0.01
Best1O88870 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.13■□□□□ 0.01
Best1O88870 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.13■□□□□ 0.01
Best1O88870 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Best1O88870 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.12■□□□□ 0.01
Best1O88870 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Best1O88870 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.12■□□□□ 0.01
Best1O88870 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.12■□□□□ 0.01
Best1O88870 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.12■□□□□ 0.01
Best1O88870 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.12■□□□□ 0.01
Best1O88870 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Best1O88870 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Best1O88870 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.11■□□□□ 0.01
Best1O88870 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.11■□□□□ 0.01
Best1O88870 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.11■□□□□ 0.01
Best1O88870 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Best1O88870 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.11■□□□□ 0.01
Best1O88870 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.11■□□□□ 0.01
Best1O88870 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Gm4899-201ENSMUST00000178708 719 ntBASIC15.11■□□□□ 0.01
Best1O88870 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.11■□□□□ 0.01
Best1O88870 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Best1O88870 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Best1O88870 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms