Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tom1O88746 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tom1O88746 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Tom1O88746 Gm8131-201ENSMUST00000213783 1570 ntBASIC20.79■□□□□ 0.92
Tom1O88746 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tom1O88746 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.79■□□□□ 0.92
Tom1O88746 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tom1O88746 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tom1O88746 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC20.78■□□□□ 0.92
Tom1O88746 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC20.78■□□□□ 0.92
Tom1O88746 Gm18766-201ENSMUST00000189811 808 ntBASIC20.78■□□□□ 0.92
Tom1O88746 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tom1O88746 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Tom1O88746 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC20.77■□□□□ 0.92
Tom1O88746 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Gm45668-201ENSMUST00000211271 493 ntBASIC20.77■□□□□ 0.92
Tom1O88746 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Tom1O88746 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tom1O88746 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.77■□□□□ 0.92
Tom1O88746 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tom1O88746 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.77■□□□□ 0.91
Tom1O88746 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tom1O88746 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tom1O88746 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.76■□□□□ 0.91
Tom1O88746 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.76■□□□□ 0.91
Tom1O88746 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Asic1-205ENSMUST00000228185 1818 ntBASIC20.76■□□□□ 0.91
Tom1O88746 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tom1O88746 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.75■□□□□ 0.91
Tom1O88746 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tom1O88746 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tom1O88746 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tom1O88746 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tom1O88746 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.75■□□□□ 0.91
Tom1O88746 Gm14042-201ENSMUST00000120139 833 ntBASIC20.75■□□□□ 0.91
Tom1O88746 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Tom1O88746 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.75■□□□□ 0.91
Tom1O88746 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.75■□□□□ 0.91
Tom1O88746 AC238811.1-201ENSMUST00000225302 441 ntBASIC20.75■□□□□ 0.91
Tom1O88746 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tom1O88746 Gm15823-201ENSMUST00000064305 670 ntBASIC20.75■□□□□ 0.91
Tom1O88746 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Tom1O88746 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tom1O88746 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tom1O88746 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Tom1O88746 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.74■□□□□ 0.91
Tom1O88746 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tom1O88746 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tom1O88746 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tom1O88746 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC20.73■□□□□ 0.91
Tom1O88746 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.73■□□□□ 0.91
Tom1O88746 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC20.73■□□□□ 0.91
Tom1O88746 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.73■□□□□ 0.91
Tom1O88746 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.73■□□□□ 0.91
Tom1O88746 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Gm6263-201ENSMUST00000120029 1342 ntBASIC20.73■□□□□ 0.91
Tom1O88746 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tom1O88746 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms