Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cldn1O88551 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cldn1O88551 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cldn1O88551 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Cldn1O88551 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Cldn1O88551 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cldn1O88551 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.52□□□□□ -0.25
Cldn1O88551 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cldn1O88551 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cldn1O88551 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cldn1O88551 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.51□□□□□ -0.25
Cldn1O88551 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.51□□□□□ -0.25
Cldn1O88551 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.51□□□□□ -0.25
Cldn1O88551 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.51□□□□□ -0.25
Cldn1O88551 Mir8117-201ENSMUST00000184773 107 ntBASIC13.51□□□□□ -0.25
Cldn1O88551 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.51□□□□□ -0.25
Cldn1O88551 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.51□□□□□ -0.25
Cldn1O88551 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.51□□□□□ -0.25
Cldn1O88551 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cldn1O88551 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cldn1O88551 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cldn1O88551 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Dancr-204ENSMUST00000132389 2347 ntBASIC13.51□□□□□ -0.25
Cldn1O88551 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cldn1O88551 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cldn1O88551 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.5□□□□□ -0.25
Cldn1O88551 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.5□□□□□ -0.25
Cldn1O88551 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cldn1O88551 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cldn1O88551 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cldn1O88551 Haglr-201ENSMUST00000100000 2085 ntBASIC13.49□□□□□ -0.25
Cldn1O88551 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.49□□□□□ -0.25
Cldn1O88551 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldn1O88551 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms