Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Gm26308-201ENSMUST00000157768 69 ntBASIC19.22■□□□□ 0.67
Cops6O88545 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.22■□□□□ 0.67
Cops6O88545 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.22■□□□□ 0.67
Cops6O88545 Gm44492-201ENSMUST00000197012 141 ntBASIC19.22■□□□□ 0.67
Cops6O88545 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.22■□□□□ 0.67
Cops6O88545 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.22■□□□□ 0.67
Cops6O88545 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Gm17271-201ENSMUST00000165535 355 ntBASIC19.21■□□□□ 0.67
Cops6O88545 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.21■□□□□ 0.67
Cops6O88545 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.21■□□□□ 0.67
Cops6O88545 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.21■□□□□ 0.67
Cops6O88545 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.21■□□□□ 0.67
Cops6O88545 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.21■□□□□ 0.67
Cops6O88545 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cops6O88545 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cops6O88545 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Cops6O88545 Chchd1-203ENSMUST00000224633 557 ntBASIC19.2■□□□□ 0.66
Cops6O88545 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cops6O88545 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Cops6O88545 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.2■□□□□ 0.66
Cops6O88545 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cops6O88545 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.19■□□□□ 0.66
Cops6O88545 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.19■□□□□ 0.66
Cops6O88545 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.19■□□□□ 0.66
Cops6O88545 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.19■□□□□ 0.66
Cops6O88545 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.19■□□□□ 0.66
Cops6O88545 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Cops6O88545 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cops6O88545 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cops6O88545 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.18■□□□□ 0.66
Cops6O88545 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cops6O88545 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cops6O88545 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.17■□□□□ 0.66
Cops6O88545 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.17■□□□□ 0.66
Cops6O88545 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms