Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.61□□□□□ -0.07
Cops4O88544 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.61□□□□□ -0.07
Cops4O88544 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Gm21814-202ENSMUST00000203277 873 ntBASIC14.61□□□□□ -0.07
Cops4O88544 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cops4O88544 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cops4O88544 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.61□□□□□ -0.07
Cops4O88544 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 BC037039-201ENSMUST00000192003 2205 ntBASIC14.61□□□□□ -0.07
Cops4O88544 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops4O88544 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.6□□□□□ -0.07
Cops4O88544 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.6□□□□□ -0.07
Cops4O88544 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.6□□□□□ -0.07
Cops4O88544 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cops4O88544 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops4O88544 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.59□□□□□ -0.07
Cops4O88544 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cops4O88544 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.59□□□□□ -0.07
Cops4O88544 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
Cops4O88544 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.59□□□□□ -0.07
Cops4O88544 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops4O88544 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Cops4O88544 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cops4O88544 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cops4O88544 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cops4O88544 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cops4O88544 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cops4O88544 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cops4O88544 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.58□□□□□ -0.08
Cops4O88544 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.58□□□□□ -0.08
Cops4O88544 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.58□□□□□ -0.08
Cops4O88544 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Cops4O88544 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.58□□□□□ -0.08
Cops4O88544 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Gm5417-201ENSMUST00000079706 384 ntBASIC14.58□□□□□ -0.08
Cops4O88544 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Cops4O88544 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cops4O88544 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms