Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.97□□□□□ -0.01
Tgfbr3O88393 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.96□□□□□ -0.01
Tgfbr3O88393 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.96□□□□□ -0.01
Tgfbr3O88393 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tgfbr3O88393 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.96□□□□□ -0.02
Tgfbr3O88393 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tgfbr3O88393 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tgfbr3O88393 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.95□□□□□ -0.02
Tgfbr3O88393 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.95□□□□□ -0.02
Tgfbr3O88393 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.95□□□□□ -0.02
Tgfbr3O88393 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.95□□□□□ -0.02
Tgfbr3O88393 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tgfbr3O88393 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Mir1895-201ENSMUST00000122615 79 ntBASIC14.94□□□□□ -0.02
Tgfbr3O88393 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Gm27494-201ENSMUST00000184735 189 ntBASIC14.94□□□□□ -0.02
Tgfbr3O88393 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tgfbr3O88393 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.94□□□□□ -0.02
Tgfbr3O88393 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Grk6-207ENSMUST00000225925 2769 ntBASIC14.93□□□□□ -0.02
Tgfbr3O88393 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.93□□□□□ -0.02
Tgfbr3O88393 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.93□□□□□ -0.02
Tgfbr3O88393 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms