Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.45■□□□□ 0.38
IkbkbO88351 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
IkbkbO88351 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
IkbkbO88351 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
IkbkbO88351 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IkbkbO88351 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IkbkbO88351 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.45■□□□□ 0.38
IkbkbO88351 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IkbkbO88351 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.44■□□□□ 0.38
IkbkbO88351 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.44■□□□□ 0.38
IkbkbO88351 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.44■□□□□ 0.38
IkbkbO88351 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
IkbkbO88351 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IkbkbO88351 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.43■□□□□ 0.38
IkbkbO88351 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
IkbkbO88351 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.43■□□□□ 0.38
IkbkbO88351 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.43■□□□□ 0.38
IkbkbO88351 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.43■□□□□ 0.38
IkbkbO88351 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IkbkbO88351 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IkbkbO88351 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.42■□□□□ 0.38
IkbkbO88351 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
IkbkbO88351 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
IkbkbO88351 Gm5864-201ENSMUST00000202263 970 ntBASIC17.42■□□□□ 0.38
IkbkbO88351 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
IkbkbO88351 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.42■□□□□ 0.38
IkbkbO88351 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IkbkbO88351 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
IkbkbO88351 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.41■□□□□ 0.38
IkbkbO88351 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IkbkbO88351 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms