Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.31■□□□□ 0.84
Ubr1O70481 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.3■□□□□ 0.84
Ubr1O70481 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.3■□□□□ 0.84
Ubr1O70481 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ubr1O70481 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.3■□□□□ 0.84
Ubr1O70481 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.3■□□□□ 0.84
Ubr1O70481 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ubr1O70481 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ubr1O70481 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.3■□□□□ 0.84
Ubr1O70481 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ubr1O70481 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr1O70481 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ubr1O70481 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Gm2272-201ENSMUST00000194903 582 ntBASIC20.29■□□□□ 0.84
Ubr1O70481 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.29■□□□□ 0.84
Ubr1O70481 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ubr1O70481 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Ubr1O70481 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Ubr1O70481 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ubr1O70481 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ubr1O70481 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.29■□□□□ 0.84
Ubr1O70481 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.29■□□□□ 0.84
Ubr1O70481 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr1O70481 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.28■□□□□ 0.84
Ubr1O70481 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.28■□□□□ 0.84
Ubr1O70481 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ubr1O70481 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr1O70481 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ubr1O70481 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubr1O70481 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubr1O70481 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubr1O70481 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.27■□□□□ 0.84
Ubr1O70481 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.27■□□□□ 0.84
Ubr1O70481 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ubr1O70481 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr1O70481 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubr1O70481 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ubr1O70481 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubr1O70481 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Ubr1O70481 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Gm6973-201ENSMUST00000117080 721 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Gm14057-201ENSMUST00000120631 482 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr1O70481 Gm10253-201ENSMUST00000194270 940 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ubr1O70481 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.26■□□□□ 0.83
Ubr1O70481 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr1O70481 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.26■□□□□ 0.83
Ubr1O70481 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr1O70481 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr1O70481 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ubr1O70481 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms