Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.56■□□□□ 0.08
Pdlim1O70400 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.56■□□□□ 0.08
Pdlim1O70400 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pdlim1O70400 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pdlim1O70400 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pdlim1O70400 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.55■□□□□ 0.08
Pdlim1O70400 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44357-201ENSMUST00000195897 142 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm19658-201ENSMUST00000196231 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44367-201ENSMUST00000196836 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44350-201ENSMUST00000197197 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44390-201ENSMUST00000197533 144 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44313-201ENSMUST00000198018 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44486-201ENSMUST00000198508 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44314-201ENSMUST00000199263 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44394-201ENSMUST00000199558 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44484-201ENSMUST00000199873 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44466-201ENSMUST00000200264 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Gm44359-201ENSMUST00000200671 138 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.55■□□□□ 0.08
Pdlim1O70400 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pdlim1O70400 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Pdlim1O70400 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Pdlim1O70400 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Pdlim1O70400 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.54■□□□□ 0.08
Pdlim1O70400 Gm6296-201ENSMUST00000222599 943 ntBASIC15.54■□□□□ 0.08
Pdlim1O70400 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim1O70400 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms