Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.23■□□□□ 0.67
Mmp8O70138 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp8O70138 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.23■□□□□ 0.67
Mmp8O70138 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Mmp8O70138 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Mmp8O70138 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Mmp8O70138 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mmp8O70138 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Gm13884-201ENSMUST00000118103 829 ntBASIC19.22■□□□□ 0.67
Mmp8O70138 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Mmp8O70138 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Mmp8O70138 Gm6376-201ENSMUST00000209407 580 ntBASIC19.22■□□□□ 0.67
Mmp8O70138 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.22■□□□□ 0.67
Mmp8O70138 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp8O70138 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.22■□□□□ 0.67
Mmp8O70138 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mmp8O70138 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Gm11452-201ENSMUST00000122376 690 ntBASIC19.21■□□□□ 0.67
Mmp8O70138 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.21■□□□□ 0.67
Mmp8O70138 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Mir8098-201ENSMUST00000184011 137 ntBASIC19.21■□□□□ 0.67
Mmp8O70138 Gm27741-201ENSMUST00000185060 237 ntBASIC19.21■□□□□ 0.67
Mmp8O70138 Gm6089-201ENSMUST00000197666 938 ntBASIC19.21■□□□□ 0.67
Mmp8O70138 Gm5864-201ENSMUST00000202263 970 ntBASIC19.21■□□□□ 0.67
Mmp8O70138 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp8O70138 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Mmp8O70138 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp8O70138 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.21■□□□□ 0.67
Mmp8O70138 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp8O70138 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Mmp8O70138 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp8O70138 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp8O70138 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp8O70138 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.2■□□□□ 0.66
Mmp8O70138 Gm15358-201ENSMUST00000119249 520 ntBASIC19.2■□□□□ 0.66
Mmp8O70138 Gm7862-201ENSMUST00000121461 292 ntBASIC19.2■□□□□ 0.66
Mmp8O70138 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp8O70138 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.2■□□□□ 0.66
Mmp8O70138 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp8O70138 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp8O70138 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp8O70138 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.19■□□□□ 0.66
Mmp8O70138 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp8O70138 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp8O70138 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp8O70138 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp8O70138 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp8O70138 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mmp8O70138 Grk6-207ENSMUST00000225925 2769 ntBASIC19.19■□□□□ 0.66
Mmp8O70138 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms