Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC14□□□□□ -0.17
Dkk1O54908 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14□□□□□ -0.17
Dkk1O54908 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14□□□□□ -0.17
Dkk1O54908 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC14□□□□□ -0.17
Dkk1O54908 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14□□□□□ -0.17
Dkk1O54908 Gm42464-201ENSMUST00000196717 417 ntBASIC14□□□□□ -0.17
Dkk1O54908 Gm42430-201ENSMUST00000197209 616 ntBASIC14□□□□□ -0.17
Dkk1O54908 Gm42452-201ENSMUST00000199749 617 ntBASIC14□□□□□ -0.17
Dkk1O54908 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14□□□□□ -0.17
Dkk1O54908 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14□□□□□ -0.17
Dkk1O54908 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14□□□□□ -0.17
Dkk1O54908 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14□□□□□ -0.17
Dkk1O54908 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Dkk1O54908 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.99□□□□□ -0.17
Dkk1O54908 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Gm7289-201ENSMUST00000168993 734 ntBASIC13.99□□□□□ -0.17
Dkk1O54908 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Gm27742-201ENSMUST00000184667 60 ntBASIC13.99□□□□□ -0.17
Dkk1O54908 Gm27704-201ENSMUST00000185094 107 ntBASIC13.99□□□□□ -0.17
Dkk1O54908 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.99□□□□□ -0.17
Dkk1O54908 AC159297.2-201ENSMUST00000219567 1075 ntBASIC13.99□□□□□ -0.17
Dkk1O54908 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Dkk1O54908 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Dkk1O54908 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Dkk1O54908 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Dkk1O54908 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Olfr129-201ENSMUST00000122318 993 ntBASIC13.98□□□□□ -0.17
Dkk1O54908 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.98□□□□□ -0.17
Dkk1O54908 Gm17063-201ENSMUST00000168135 456 ntBASIC13.98□□□□□ -0.17
Dkk1O54908 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC13.98□□□□□ -0.17
Dkk1O54908 Gm28450-201ENSMUST00000187349 638 ntBASIC13.98□□□□□ -0.17
Dkk1O54908 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC13.98□□□□□ -0.17
Dkk1O54908 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC13.98□□□□□ -0.17
Dkk1O54908 AC126673.2-201ENSMUST00000221052 686 ntBASIC13.98□□□□□ -0.17
Dkk1O54908 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Dkk1O54908 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Dkk1O54908 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms