Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.51□□□□□ -0.41
Efnb3O35393 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.51□□□□□ -0.41
Efnb3O35393 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efnb3O35393 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efnb3O35393 Gm5417-201ENSMUST00000079706 384 ntBASIC12.51□□□□□ -0.41
Efnb3O35393 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efnb3O35393 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Efnb3O35393 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efnb3O35393 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Efnb3O35393 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Efnb3O35393 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Efnb3O35393 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 BC037039-201ENSMUST00000192003 2205 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Gm11539-201ENSMUST00000119837 557 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Mir6982-201ENSMUST00000184354 68 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.5□□□□□ -0.41
Efnb3O35393 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Efnb3O35393 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.5□□□□□ -0.41
Efnb3O35393 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.5□□□□□ -0.41
Efnb3O35393 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Efnb3O35393 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Efnb3O35393 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Efnb3O35393 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Efnb3O35393 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.49□□□□□ -0.41
Efnb3O35393 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Efnb3O35393 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Efnb3O35393 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms