Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Gm13036-201ENSMUST00000117799 748 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.37■□□□□ 0.21
Ebf3O08791 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Gm14140-201ENSMUST00000119999 995 ntBASIC16.36■□□□□ 0.21
Ebf3O08791 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Gm27628-201ENSMUST00000184911 107 ntBASIC16.36■□□□□ 0.21
Ebf3O08791 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ebf3O08791 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebf3O08791 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Ebf3O08791 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ebf3O08791 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.35■□□□□ 0.21
Ebf3O08791 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ebf3O08791 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.35■□□□□ 0.21
Ebf3O08791 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.35■□□□□ 0.21
Ebf3O08791 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ebf3O08791 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebf3O08791 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Gm7222-201ENSMUST00000117512 906 ntBASIC16.34■□□□□ 0.21
Ebf3O08791 Gm14494-201ENSMUST00000118786 435 ntBASIC16.34■□□□□ 0.21
Ebf3O08791 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.34■□□□□ 0.21
Ebf3O08791 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebf3O08791 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ebf3O08791 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ebf3O08791 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms