Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3aO08759 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3aO08759 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ube3aO08759 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3aO08759 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3aO08759 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ube3aO08759 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ube3aO08759 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ube3aO08759 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Gm16061-201ENSMUST00000122167 857 ntBASIC17.11■□□□□ 0.33
Ube3aO08759 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Ube3aO08759 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ube3aO08759 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3aO08759 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ube3aO08759 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube3aO08759 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ube3aO08759 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.1■□□□□ 0.33
Ube3aO08759 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ube3aO08759 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube3aO08759 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3aO08759 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube3aO08759 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube3aO08759 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Gm7213-201ENSMUST00000215977 950 ntBASIC17.09■□□□□ 0.33
Ube3aO08759 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.09■□□□□ 0.33
Ube3aO08759 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube3aO08759 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ube3aO08759 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube3aO08759 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ube3aO08759 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3aO08759 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube3aO08759 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ube3aO08759 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.08■□□□□ 0.32
Ube3aO08759 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Ube3aO08759 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube3aO08759 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ube3aO08759 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ube3aO08759 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.07■□□□□ 0.32
Ube3aO08759 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3aO08759 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.07■□□□□ 0.32
Ube3aO08759 Gm13436-201ENSMUST00000120418 567 ntBASIC17.07■□□□□ 0.32
Ube3aO08759 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Ube3aO08759 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3aO08759 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms